I'm trying to use the dmvnorm
function from the mvtnorm
package to compute the log-likelihood of a random normal vector. However, when I check the output of dmvnorm
against my computation of the log-likelihood function the dmvnorm
output is always almost exactly my result multiplied by 1.7. What's going on? Am I computing the likelihood wrong? Am I using the dmvnrom
function wrong? Here's my code
x <- rmvnorm(1, sigma = C1) loglik <- dmvnorm(x, sigma = C1, log = T) y <- t(x) deter2pi <- function(mat){ determinant(2*pi*mat)[[1]][1] } ll <- (-0.5*t(y)%*%solve(C1,y)-0.5*log(deter2pi(C1)))[1] loglik/ll # = 1.7
And my covariance matrix
> round(C1,3) [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [,9] [,10] [1,] 1.000 0.743 0.545 0.421 0.309 0.215 0.159 0.120 0.084 0.059 [2,] 0.743 1.000 0.733 0.564 0.413 0.289 0.213 0.161 0.113 0.079 [3,] 0.545 0.733 1.000 0.766 0.561 0.393 0.290 0.220 0.154 0.108 [4,] 0.421 0.564 0.766 1.000 0.732 0.511 0.377 0.286 0.200 0.141 [5,] 0.309 0.413 0.561 0.732 1.000 0.695 0.515 0.390 0.273 0.192 [6,] 0.215 0.289 0.393 0.511 0.695 1.000 0.736 0.559 0.391 0.275 [7,] 0.159 0.213 0.290 0.377 0.515 0.736 1.000 0.758 0.531 0.372 [8,] 0.120 0.161 0.220 0.286 0.390 0.559 0.758 1.000 0.700 0.491 [9,] 0.084 0.113 0.154 0.200 0.273 0.391 0.531 0.700 1.000 0.699 [10,] 0.059 0.079 0.108 0.141 0.192 0.275 0.372 0.491 0.699 1.000
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Best Answer
By default, determinant returns the log of the determinant.
x <- rmvnorm(1, sigma = C1) loglik <- dmvnorm(x, sigma = C1, log = T) y <- t(x) deter2pi <- function(mat){ determinant(2*pi*mat,log=FALSE)[[1]][1] } ll <- (-0.5*t(y)%*%solve(C1,y)-0.5*log(deter2pi(C1)))[1] loglik/ll
does return the value 1 for the ratio.
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