Solved – Kolmogorov-Smirnov test with dependent data

Let's say, I have 100 students, each of them have 2 scores: reading score and writing score, so basically I will have 2 vectors with the length of each is 100.

I want to test the distribution of reading score and writing score are the same or not, so I want to use Kolmogorov-Smirnov test, but is it okay to run the test with dependent data?

the Kolmogorov-Smirnov test is only to be used if the samples are independent. However, here you can find a script that does the job in form of a permutation test (in R).

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